Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGGTGGCGGCCGCGGAGGAGGAGAAGCTCCACAAGCCTCCTGCAGA
((((((((((((((((.((((&))))......))))))))))........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024451023
GeneSymbolSLC16A3
Binding site1530,1581
Score0.846
Seed1
Au0.309
Energy-21.1
Binding len51
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end7
PositionCDS
2D Structure