Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAAGCAGCTGCC
..((((((((..(((((((..&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024451051
GeneSymbolCHD1L
Binding site398,414
Score1.0
Seed1
Au0.515
Energy-22.8
Binding len16
Me-11.129
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure