Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCTGCAGCA
.....(((((((..(((((((&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024451051
GeneSymbolCHD1L
Binding site714,729
Score0.846
Seed0
Au0.441
Energy-20.9
Binding len15
Me-15.812
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure