Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAAGAAGCAGCTGCC
..((((((((..((((.....&))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024451051
GeneSymbolCHD1L
Binding site995,1011
Score0.923
Seed1
Au0.529
Energy-19.2
Binding len16
Me-11.129
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure