Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGAAAAATGTAGAGTGTGCCCGTGTGTATGCCGA
...(((((((((..(((.((((&.)))).))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011523098
GeneSymbolCHMP1A
Binding site210,249
Score0.846
Seed0
Au0.485
Energy-16.8
Binding len24
Me-8.661
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure