Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTCCAAGGTGCAGACAGCTGTGACTATGAAGGGGGTGGGCCAGG
..(((((((((((((..((((.&.))))..)))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011523098
GeneSymbolCHMP1A
Binding site316,362
Score0.846
Seed1
Au0.368
Energy-22.4
Binding len22
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure