Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCGGCGGCAGCTGGGC
.(.(((((((.(((((..(((&))).))))).))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346218
GeneSymbolUNC79
Binding site1493,1513
Score0.846
Seed0
Au0.382
Energy-24.1
Binding len20
Me-8.176
Phylopstem5.335431631428571
Phylopflank4.9831396105
Longest consecutive pairings7
Position of longest consecutive pairings3
Pairings in 3prime end6
PositionCDS
2D Structure