Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCAGCCCTCCGAAAGTGGTTGCAGT
((((((((((((((((.((((&)))).))))))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346218
GeneSymbolUNC79
Binding site8048,8078
Score0.846
Seed1
Au0.397
Energy-23.4
Binding len30
Me-3.938
Phylopstem4.644014708333334
Phylopflank4.85820944875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure