Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGATGTGGTCAACGGGCTACTGCAGCACATCCTGTGCCAGGG
.(((((((((..((((......&.))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011524276
GeneSymbolNT5C3B
Binding site668,713
Score0.923
Seed1
Au0.382
Energy-19.8
Binding len17
Me-9.965
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure