Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGCAGGAGCCC
....(((((((..((((((...&)))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011525119
GeneSymbolSMIM5
Binding site65,80
Score0.923
Seed0
Au0.338
Energy-23.1
Binding len15
Me-14.182
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure