Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGATAGCTGTACTTTCACGAAGAAATTCTTTGTTACAAGCTGCT
..(((((((((((((((((((&)))))..))))))))...........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330414
GeneSymbolBCAS3
Binding site687,736
Score0.846
Seed1
Au0.574
Energy-19.2
Binding len49
Me-4.957
Phylopstem0.6947644583333333
Phylopflank0.1718081125
Longest consecutive pairings8
Position of longest consecutive pairings34
Pairings in 3prime end8
PositionCDS
2D Structure