Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTGAGGAGCCGGG
..((((((((((...((((...&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011527493
GeneSymbolSHKBP1
Binding site392,407
Score1.0
Seed1
Au0.368
Energy-22.5
Binding len15
Me-7.838
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure