Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCAAGATGGCGCCAGTGC
(((((((.((..(((.(((...&))).))).)).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_024451393
GeneSymbolZNF558
Binding site4168,4187
Score0.846
Seed1
Au0.382
Energy-21.9
Binding len19
Me-12.656
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure