Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACATAGTGGCCGGGTG
(((((((.(((.((((......&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011527919
GeneSymbolCPAMD8
Binding site6797,6813
Score0.846
Seed1
Au0.294
Energy-17.7
Binding len16
Me-9.598
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure