Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATATCGTGCTAGA
..(((((((...(((((((...&)))))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011528178
GeneSymbolSGTA
Binding site138,156
Score0.846
Seed1
Au0.544
Energy-17.4
Binding len18
Me-12.371
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end5
Position5UTR
2D Structure