Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGGATGCCGGGA
.(((((((..((..(((((...&)))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011528938
GeneSymbolCOL20A1
Binding site2901,2918
Score1.0
Seed1
Au0.397
Energy-19.6
Binding len17
Me-8.238
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure