Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTGCCAGGAGCCAGGAGCCACGTGA
(((((((((((((((((.((((&))))..))))))...)))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011528938
GeneSymbolCOL20A1
Binding site2464,2492
Score0.923
Seed1
Au0.368
Energy-27.5
Binding len28
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure