Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGATGGGAAAAAGGGGAGGGGAGGCAGTT
.((((.(((((((((.......&.))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011529109
GeneSymbolCD40
Binding site572,603
Score0.872
Seed0
Au0.426
Energy-20.5
Binding len16
Me-5.927
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end1
Position3UTR
2D Structure