Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGAACACTGGATGGGAAAAAGGGGAGGGGAGGCAGTTTGGGGGTGTG
(.(((((((.((((((((.((&.))..)))))))).))...))))).).
Details
MiRNAhsa-miR-4725-5p
RefseqIDXM_011529109
GeneSymbolCD40
Binding site566,613
Score0.846
Seed1
Au0.441
Energy-25.8
Binding len27
Me-6.344
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure