Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAGAGGGCGGGTA
.(((.((.(((((((((((...&))))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011530260
GeneSymbolTTC38
Binding site1817,1835
Score0.846
Seed0
Au0.382
Energy-28.0
Binding len18
Me-10.226
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure