Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCACCCGCAGCCGCGAC
((((.(((((((.(((..(((&))).))).))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024451661
GeneSymbolSMARCA4
Binding site4448,4469
Score0.846
Seed0
Au0.353
Energy-23.6
Binding len21
Me-9.346
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure