Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAGGATGCCAA
...(((((((..(((((((...&)))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011532103
GeneSymbolDDX60
Binding site4378,4394
Score0.923
Seed0
Au0.471
Energy-21.5
Binding len16
Me-12.686
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure