Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCTCCCAGAGTCATTTACTAGGGAGAGATAGTCCCAGTGC
((((((((((((((((((..((&))..)))))))..........)))))........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011532360
GeneSymbolUSP38
Binding site3084,3125
Score0.923
Seed1
Au0.574
Energy-23.3
Binding len41
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings30
Pairings in 3prime end6
PositionCDS
2D Structure