Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGCCAGGACTGACCAGG
..(((((((((..(((((((((&)))))))))..))))..).)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011533163
GeneSymbolCAPN13
Binding site1626,1650
Score0.846
Seed1
Au0.426
Energy-25.5
Binding len24
Me-9.593
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure