Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGTGTAACTGTGGACATCACCATTCAGGAAGGACGTCTTGCATGGCTGGTA
.((((((((((((((((((...&.))))))))))))...........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011534636
GeneSymbolRANBP17
Binding site1450,1504
Score0.846
Seed1
Au0.515
Energy-19.6
Binding len31
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings18
Pairings in 3prime end5
PositionCDS
2D Structure