Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTAGGAAGGAAGGGCAGAGTCCCAGGTGTCAGCTGGTGG
(((((((((((((((((((...&)))))))))))).....................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011534745
GeneSymbolCLN8
Binding site6497,6538
Score0.923
Seed1
Au0.353
Energy-25.3
Binding len41
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings29
Pairings in 3prime end5
Position3UTR
2D Structure