Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTATATTTTTATTAGAGATGGGGTTTTGCCATGTTGGCCAGGC
.((((((..(((..(((((...&.)))))..)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_011535230
GeneSymbolRNASEH2B
Binding site3685,3729
Score0.846
Seed1
Au0.515
Energy-18.9
Binding len20
Me-9.309
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure