Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGGGGGCGGCCAGG
..((((((.((((((((((...&)))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011535434
GeneSymbolCOL12A1
Binding site9191,9209
Score0.846
Seed1
Au0.279
Energy-23.8
Binding len18
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure