Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCCAGGAGTCACAGGACCAAGTGGGAAGCCAGG
..((((((((((((((((.((.&)).)))))))...............)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011535434
GeneSymbolCOL12A1
Binding site8900,8936
Score0.846
Seed1
Au0.412
Energy-23.7
Binding len36
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings26
Pairings in 3prime end6
PositionCDS
2D Structure