Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGATCCTGCTAGTGGTCG
.((((((((((...((((((.&))))))..)))).)).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDXM_011535434
GeneSymbolCOL12A1
Binding site5627,5648
Score1.0
Seed1
Au0.544
Energy-23.8
Binding len21
Me-9.286
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure