Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGAGCCGGGCTGCT
..((((((.(((((.(.((((&))))..).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346229
GeneSymbolRELCH
Binding site30,50
Score1.0
Seed1
Au0.338
Energy-22.2
Binding len20
Me-6.749
Phylopstem0.9373846666666669
Phylopflank1.1646853746969696
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure