Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCATGAGAGGTAAAGCCAGG
..((((((((((((..((((((&))))))..))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011536062
GeneSymbolPRDM1
Binding site141,165
Score0.846
Seed1
Au0.5
Energy-27.8
Binding len24
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure