Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGATTGCGTGGCTCTTTCAGAAGACCCAGGAAGGGCAGCTCCAGCCAGA
..(((((((((((((((((...&.)))))))))))........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011537585
GeneSymbolSLC36A1
Binding site4168,4218
Score1.0
Seed1
Au0.397
Energy-27.5
Binding len27
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure