Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACTCAGAGGGCATGAGCCC
....((((((((((((((((((&)))))))))))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011537585
GeneSymbolSLC36A1
Binding site1558,1580
Score0.846
Seed0
Au0.426
Energy-25.6
Binding len22
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure