Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCATCTTGTGTCCTCCACAGGGGCCAGTGG
(((((((((((..((((((...&)))))).................))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_011540730
GeneSymbolCOL16A1
Binding site1907,1942
Score0.846
Seed1
Au0.368
Energy-28.0
Binding len35
Me-8.574
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure