Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCAGTTTTTGGGGGCCATGTA
.((((((((((..((((.....&)))).....)))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017000717
GeneSymbolKDM1A
Binding site3338,3359
Score0.846
Seed1
Au0.412
Energy-19.9
Binding len21
Me-8.429
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end3
Position3UTR
2D Structure