Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTTACTGAGTGGAGTGTGCCAGA
..(((((((((...........&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017000945
GeneSymbolCATSPERE
Binding site297,321
Score1.0
Seed1
Au0.632
Energy-16.5
Binding len11
Me-11.418
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure