Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGGGTGAAGTTGAGAGCAATGGCCCAACCTCAGCTGTAT
.((((((((.(((((...(((&.)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024453353
GeneSymbolC3orf49
Binding site141,184
Score1.0
Seed1
Au0.515
Energy-22.5
Binding len19
Me-5.269
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position5UTR
2D Structure