Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGAGCCGCGGCGCGAG
((((.(((((((((.((((((&)))))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346249
GeneSymbolRALGAPA1
Binding site256,277
Score0.846
Seed0
Au0.221
Energy-30.0
Binding len21
Me-8.792
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure