Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTGTGCTACACAAAATATGCCAGGA
.(((((((((...(((((....&.))))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017001914
GeneSymbolPOGK
Binding site5721,5750
Score0.846
Seed1
Au0.574
Energy-19.8
Binding len21
Me-11.254
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure