Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCAGCCGCAGCAGTGAC
((((.((((((((((......&.)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_024453487
GeneSymbolSETD2
Binding site6872,6893
Score0.923
Seed0
Au0.412
Energy-21.4
Binding len17
Me-8.29
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure