Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCAGCTGTGCCTAGGG
.(((((((((...(((((((((&)))))))))..)))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001346252
GeneSymbolUSP28
Binding site3316,3338
Score0.923
Seed1
Au0.515
Energy-22.0
Binding len22
Me-11.254
Phylopstem4.861425433333334
Phylopflank5.958345286249999
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure