Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCCTCTCACATCTACTTGTGGGCCTAGGG
.((((((.(((((.((((((..&.))))))))))).))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017003842
GeneSymbolSH2D6
Binding site2646,2677
Score0.846
Seed1
Au0.426
Energy-20.4
Binding len21
Me-6.964
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure