Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGTGCCAGGAATAGTAACATTATGAATGCCAGG
..(((((((((..((((((((.&))))))))....)))).................))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017004324
GeneSymbolMAP3K20
Binding site5263,5302
Score0.846
Seed1
Au0.515
Energy-24.4
Binding len39
Me-9.593
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end7
Position3UTR
2D Structure