Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCCAGGATGGTGCCAGGG
.((((((((.............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017004661
GeneSymbolSCN3A
Binding site2367,2386
Score0.923
Seed1
Au0.456
Energy-15.8
Binding len10
Me-14.322
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure