Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATATGTATGCTGGT
..(((((((((.(((((((...&)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017004826
GeneSymbolRGPD8
Binding site1060,1077
Score0.846
Seed1
Au0.603
Energy-18.6
Binding len17
Me-8.304
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure