Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCCTAATGATGCATCATGCCAGGA
.((((((((...(((((.....&.))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017004958
GeneSymbolCLIP4
Binding site281,307
Score0.923
Seed1
Au0.676
Energy-17.7
Binding len16
Me-11.207
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure