Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGAGAGGTGGCTT
....(((((((((((((((...&))))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017004958
GeneSymbolCLIP4
Binding site109,126
Score0.923
Seed0
Au0.368
Energy-23.7
Binding len17
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure