Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCGGAGTAGGAGGGAGCGGGTA
.(((.((((((((((((((...&)))....))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017006936
GeneSymbolHHATL
Binding site1817,1840
Score1.0
Seed0
Au0.426
Energy-23.6
Binding len23
Me-7.912
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure