Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTTAGACGAGTGTTTGGAAGGGGCCATGGTGG
(((((((((((((((((((...&)))))))...........)))))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001346273
GeneSymbolUSP28
Binding site1044,1077
Score0.885
Seed1
Au0.471
Energy-21.4
Binding len33
Me-3.938
Phylopstem4.285547665625
Phylopflank4.703906106249999
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure